Polymorphism: rs2476601
rs2476601
(
SNPedia |
23andMe
)
Variant Type: SNP
Location: 1p13.2
Factor:
- Symbol: PTPN22
- Name: protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
- Entrez ID: 26191
- Ensembl ID: ENSG00000134242
Factors:
PTPN22
protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
(
26191
/
ENSG00000134242
)
Description:
Frequency of PTPN22*T1858 carriers does not differ significantly in nona/centenarians and in octogenarians respect to young group. Detailed OR data is as follows: Nona/centenarian males: 1.08 (0.53–2.24), octagenarian males: 0.85 (0.43–1.69). Nona/centenarian females: 0.79 (0.29–2.15), octagenarian females: 0.79 (0.35–1.82). Detailed P-value data is as follows: Nona/centenarian males: 0.853, octagenarian males: 0.722. Nona/centenarian females: 0.799, octagenarian females: 0.663.
Trivial name is 1858 C>T (R620W).
Ethnicity:
Italian
Age of cases: Mean age 93
Finding: Negative
Statistics
- Number of cases/controls: 225 vs 278 (initial)
- Odds ratio type: Longer
- p-value:
0.663
- Significant: No
Study Design
- Study type: Candidate Region/Gene
- Technology: PCR and gel electrophoresis
Reference:
21113673: PTPN22 1858C>T (R620W) functional polymorphism and human longevity.
Choice: Clean
Created: June 30, 2013, midnight
Updated: Aug. 8, 2014, 1:05 p.m.
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