Factors

We need to know every factor which determines lifespan.

Lifespan factors often but not always originate from defined genetic elements. They are not just genes, by definition they can be anything for which a Classifications schema can be build for that is related to the regulation of lifespan, such entities may include Single-Nucleotide Polymorphism, transcript variants, proteins and their complexes, compounds (i.e. small molecules like metabolites and drugs), etc. A factor should be based on a defined molecular entity or genomic position and been classified. It shall be highly flexible and scalable Concept.

While individual lifespan factors within each species or precise defined molecular entities will be captured within the Lifespan App, Data Entries of the Data App may summarize for instance the relevance of each factor class (e.g. homologous group; chemical derivate of related structure and properties, etc.) as well as draw overall conclusions. o

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  • symbol name observation species
    Zmpste24 zinc metallopeptidase, STE24 homolog (S. cerevisiae) Knockout mice exhibit nuclear architecture abnormalities and signs of accelerated ageing. House mouse
    ztf-12 Zinc finger Transcription Factor family RNA interference of ztf-12 results in a shortened lifespan. ztf-12 is a target of daf-16 [16380712]. Nematode
    ZDS2 Zillion Different Screens 2 Deletion of ZDS2 decreases replicative lifespan by about 20% [10662670]. ZDS2 null mutation decreases rDNA silencing five-fold, increases silencing at a mutant HMR that lacks the Rap1-binding site in the HNR-E silencer three-fold, and has no effect on telomeric silencing. ZDS2 deletion decreases rDNA silencing, increases rDNA recombination, and increases level of phosphorylated Sir3 [10662670]. Budding yeast
    YUH1 Yeast Ubiquitin Hydrolase 1 Deletion of YUH1 decreases replicative lifespan decreased 30% in the alpha strain [18340043]. Budding yeast
    sir-2.1 Yeast SIR related 1 sir-2.1 deletion slightly reduces lifespan of wild-type [16860373]. sir-2.1 overexpression extends lifespan by about 50% and this lifespan extension depends on DAF-16 activity as it is suppressed by mutation in daf-16 and it does not synergize with daf-2 [11242085]. sir-2.1 suppresses longevity of unc-13 and eat-2, but not daf-2 or unc-64 mutants. sir-2.1 is therefore partially required for lifespan extension from mutation of eat-2 [16860373], but is completely independent for lifespan extension from DR using a reduced feeding protocol [Kaeberlein et al. in press]. sDR increases lifespan of wild-type and sir-2.1 mutants to the same extent [19239417]. Overrexpression of sir-2.1 synergizes with TGF-beta mutation (daf-4 and daf-1) for dauer formation [11242085]. Nematode
    YPT7 Yeast Protein Two 7 YPT7 deletion decreases replicative lifespan by 15% in the alpha strain [18340043]. Deletion of YPT7 cancels out replicative lifespan extension of 0.5% glucose restriction and results under DR also into a shorter replicative lifespan than under AL [18690010]. Budding yeast
    YPK1 Yeast Protein Kinase 1 Deletion of YPK1 decreases replicative lifespan by 20% in the alpha strain [18340043]. Budding yeast
    YPC1 Yeast Phyto-Ceramidase 1 Deletion of YPC1 decreases replicative lifespan by 15% in the alpha strain [19030232]. Budding yeast
    YOS9 Yeast OS-9 homolog Deletion of YOS9 decreases replicative lifespan by 10% in the alpha strain [19030232]. Budding yeast
    YME1 Yeast Mitochondrial Escape 1 Deletion of YME1 decreases chronological lifespan by 50% [17492370] as well as replicative lifespan by 45% in the alpha strain [18340043]. Budding yeast
    YHC3 Yeast Homolog of human Cln3 YHC3 deletion decreases 10-20% shortened lifespan [16435200]. Budding yeast
    YFH1 Yeast Frataxin Homolog 1 Deletion of YFH1 decreases replicative lifespan by 50% [15130665]. Budding yeast
    XPA Xeroderma pigmentosum, complementation group A Mutant mice exhibit symptoms of premature ageing, including reduced lifespan, osteoporosis and kyphosis, osteosclerosis, early greying, cachexia, and infertility. House mouse
    Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 XRCC5 and XRCC6 double knockout mice show decreased lifespan and signs of premature ageing without increase cancer incidence. House mouse
    Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 Deletion results in signs of premature ageing such as osteopenia, atrophic skin, hepatocellular degeneration, and age specific mortality. House mouse
    wwp-1 WW domain Protein (E3 ubiquitin ligase) 1 RNA interference of wwp-1 decreases median lifespan by 9% in wild-type animals and 24% in daf-2 mutants [18006689]. Loss of wwp-1 function by RNAi or mutation reduces lifespan at 25 degree Celsius, but not 20 degree Celsius. wwp-1 overexpression extends lifespan by up to 20%. Reduced levels of wwp-1 completely suppress the extended longevity of eat-2 mutants. Lifespan of wwp-1 mutants across entire food concentration range by bacterial dilution in liquid culture or on solid plates does not noticeable change. There is no difference in wwp-1 mRNA levels under AL and DR. RNAi reduction of pha-4, but not of daf-16 suppresses increased longevity by wwp-1 overexpression. Mutations in iron sulphur component of complex III, isp-1, increases longevity by reducing mitochondrial function. wwp-1 RNAi does not suppress the extended lifespan of isp-1 mutants and has only minor suppressive effects on lifespan of another mitochondrial mutant, clk-1, and in cyc-1 RNAi treated worms. RNAi depletion of wwp-1 has no effect on long lifespan of daf-2 mutants [19553937]. Nematode
    WRN Werner syndrome, RecQ helicase-like Mutation in WRN causes Werner Syndrome which characteristics includes prematurely aged facies, scleroderma-like skin changes, cataracts, arteriosclerosis, subcutaneous calcification, and diabetes mellitus [McKusick et al. 1963; 5327241]. Inheritance is autosomal recessive and malignancy is frequent. THe frequency is 3 per million individuals in Japan [7460386]. Cells from a Werner heterozygote exit the cell cycle at a faster rate than do normal cells [8265666]. Loss of WRN promoter aberrant mitotic recombination [11316787]. The single nucleotide polymorphism rs1800392 in WRN has been associated with exceptional longevity in a plethora of genetic signatures [22279548]. WRN was found to be associated with longevity [10069711; 20855428; 20855428; 20855428 ;17903295; 22406557; 16405962; 16405962; 16405962; 20855428; 20855428; 20855428; 22279548]. WRN was found to be associated with longevity [24244950]. Human
    VMS1 VCP/Cdc48-associated Mitochondrial Stress-responsive 1 Deletion of VMS1 decreases replicative lifespan by 25% in the alpha strain [19030232]. Budding yeast
    VAC14 VACuole morphology and inheritance mutant 14 VAC14 mutants have a single vacuole and shortened lifespan on normal media [16293764]. Budding yeast
    vps-33.1 Vacuolar sorting protein RNA interference of vps-33.1 decreased median lifespan 30% in daf-2 mutants and 15% in a wild-type background [18006689]. Nematode
    VPS20 Vacuolar Protein Sorting 20 VPS20 deletion decreases mean and maximum replicative lifespan by 16% and 19%, respectively, and additionally cancels out the DR-induced replicative lifespan extension [22912585]. Budding yeast
    VAM7 VAcuolar Morphogenesis 7 VAM7 deletion decreases replicative lifespan under AL and blocked DR-mediated lifespan extension. Replicative lifespan decreases by 70% on DR in VAM7 deletion mutant [18690010]. Budding yeast
    VAM3 VAcuolar Morphogenesis 3 Deletion of VAM3 decreases mean replicative lifespan by 56% both on AL [19030232] and on moderate DR [18690010] (in BY4742/alpha strain). Budding yeast
    VMA2 Vacuolar Membrane Atpase 2 VMA2 deletion mutants have a reduced ΔΨ and mitochondrial morphology similar to aged cells. The restoration of the vacuolar acidity in daughter cells requires V-ATPase activity as it is eliminated in VMA2 deletion mutant cells [23172144]. VMA2 deletion mutation decreases the mean replicative lifespan by 80% in the alpha strain [18340043]. Deletion of VMA2 decreases mean, median and maximum replicative lifespan by 84%, 84% and 70%, respectively. DR (0.5% glucose restriction) does not extend the replicative lifespan of VMA2 and shortens it even more [23172144]. Budding yeast
    unc-10 UNCoordinated Mutation in unc-10 reduces maximum lifespan 35% [17592521]. Nematode
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    • 25 of 321 factors
    Factors are an extension of GenAge and GenDR.

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